Iphione fimbriata

goat
bioproject_species
Genome portal
Access to genome browser and other tools for the genome - Pending
Resampling required
Sample collected
Sample acquired
Data generation
In assembly
Submitted
Insdc open
  • Scientific name accepted: Iphione fimbriata
  • Synonym: Iphione sp. A-MEVVRFRX5
  • Authority: Quatrefages, 1866
  • Phylum: Annelida
  • Genus: Iphione
  • Species: Iphione fimbriata
  • Ploidy: Unknown
  • Common name: No common name known
© By ATLASea photography team. License CC-BY-NC-SA-4.0
  • Collect event: MI-Kanameco
  • Coordinator(s): Sarah Samadi | Nicolas Puillandre
  • Operator(s): NOT_PROVIDED
  • Taxonomist(s): Stéphane Hourdez
  • Date: March 14, 2024
  • Site (sea): Pacific Ocean
  • Site (region): Platier ricaudy
  • Latitude: -22.310562
  • Longitude: 166.457973

No occurrence data available from GBIF

  • ToLID prefix: wpIphSpea
  • Iphione fimbriata archive: pending
  • Genome data portal (pending)
  • GoaT
  • WoRMS
  • NCBI
  • GBIF (pending)
  • OBIS
  • INPN (pending)
  • OpenObs (pending)
  • ENA BioProject of the sequencing raw data: PRJEB94362
  • ENA BioProject of the genome assembly: PRJEB94363
  • Assembly accession: GCA_976226885
  • EAR report with genome assembly metrics: PDF
  • Assembly ploidy: Not communicated
  • Sequencing: Not communicated
  • Size: 1.18 Gbp
  • GC content: 43.32%
  • Number of chromosomes: 11
  • Number of scaffolds: 89
  • N50 of scaffolds: 104.33 Mbp
  • L50 of scaffolds: 5
  • Number of contigs: 405
  • N50 of contigs: 6.59 Mbp
  • L50 of contigs: 44
  • Protein-coding genes: Undetermined
  • Gene length (average): Undetermined
  • Gene length (median): Undetermined
  • CDS length (average): Undetermined
  • CDS length (median): Undetermined
  • CDS proportion (genome): Undetermined
  • Genes without introns: Undetermined
  • Number of contigs with at least one gene (genome): Undetermined
  • Number of contigs with at least one gene (bases): Undetermined

BUSCO structural annotations completeness

BUSCO v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)

Genome

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined

Proteins

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined