Ophioderma longicaudum

Genome portal
Access to genome browser and other tools for the genome
Resampling required
Sample collected
Sample acquired
Data generation
In assembly
Insdc open
  • Scientific name accepted: Ophioderma longicaudum
  • Synonym: Ophioderma longicauda
  • Authority: (Bruzelius, 1805)
  • Phylum: Echinodermata
  • Genus: Ophioderma
  • Species: Ophioderma longicaudum
  • Ploidy: Unknown
  • Common name: No common name known
  • Collect event: MI-GolfeDuLion
  • Coordinator(s): Line Le Gall
  • Operator(s): HOURDEZ Stéphane, VASSARD Emmanuel, LE GALL Line, UTGE José, LABRUNE Céline
  • Date: Oct. 2, 2023
  • Site (sea): Mediterranean Sea
  • Site (region): Banc de roches de Torreilles
  • Latitude: 42.77015
  • Longitude: 3.09512

World occurrences from GBIF

  • ENA BioProject of the sequencing raw data: PRJEB85129
  • ENA BioProject of the genome assembly: PRJEB85130
  • Assembly accession: GCA_965120465
  • EAR report with genome assembly metrics: PDF
  • Assembly ploidy: 2.0
  • Sequencing: Not communicated
  • Size: 3.24 Gbp
  • GC content: 37.78%
  • Number of chromosomes: 25
  • Number of scaffolds: 933
  • N50 of scaffolds: 124.73 Mbp
  • L50 of scaffolds: 12
  • Number of contigs: 3323
  • N50 of contigs: 2.6 Mbp
  • L50 of contigs: 376
  • Protein-coding genes: Undetermined
  • Gene length (average): Undetermined
  • Gene length (median): Undetermined
  • CDS length (average): Undetermined
  • CDS length (median): Undetermined
  • CDS proportion (genome): Undetermined
  • Genes without introns: Undetermined
  • Number of contigs with at least one gene (genome): Undetermined
  • Number of contigs with at least one gene (bases): Undetermined

Genome (BUSCO results, with eukaryota lineage dataset)

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined

Proteins

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined